Data
Protocols, Data and Resources
Protocols
- Synthetic Genetic Array (SGA) protocol
- Reporter-SGA
- Genome-wide Synthetic Dosage Lethal (SDL) screening (Coming soon)
- High Content Screening (SGA-HCS) (Coming soon)
Databases
- Yeast Kinase Interaction Database (Yeast KID)
- Data repository of high-content cell imaging projects (TheCellVision)
- Collection of Yeast Cell and Localization Patterns (CYCLOPS)
- Data Repository of Yeast Genetic Interactions (TheCellMap)
- Database of protein and genetic interactions (BioGRID)
Over-expression Libraries and Collections
Our lab has a series of overexpression collections in both yeast and E-coli. We are happy to provide you with specific strains or plasmids upon request. The GST and mORF libraries are available in full through Open BioSystems. Not all genes are available in all collections. To search for your favourite gene’s availability, please click on the icons below to download the appropriate EXCEL files. When requesting a strain, please provide the name of the collection, the ORF and gene name, whether you would like the bacterial or yeast strain, as well as the coordinates from the requested library. To receive strains from the MoBY collection, please contact Dr. Charlie Boone’s lab.
Collection | Copy# | Promoter | Sequence Verified? | Tag | # of ORFs | Yeast Marker | Yeast/E-coli |
---|---|---|---|---|---|---|---|
GST Sopko et al, 2006 Zhu et al, 2000 |
High 2µ | GAL1/10 inducible | Some | N-terminal GST | 5280 | URA3,leu2d | Yeast & E-coli |
mORF Gelperin et al, 2005 |
High 2µ | GAL1/10 inducible | Yes (both ends of ORFs) | C-terminal His6-HA-ProteinA | 5854 | URA3
Gateway |
E-coli |
FLEX Hu et al, 2007 |
Low CEN | GAL1/10 inducible | Yes (fully verified) | None | 5200 | URA3
Gateway Barcoded |
Yeast & E-coli |
MoBY (Ver 1.0) Ho et al, 2009 |
Low CEN | Native | Yes (3' end of ORFs and both barcodes) | None | 5037 | URA3
MAGIC Barcoded |
Yeast(254) & E-coli |
MoBY (Ver 2.0) Magtanong et al, 2011 |
High 2µ | Native | Yes (3' end of ORFs and both barcodes) | None | 4527 | LEU2
MAGIC Barcoded |
E-coli |